Hi John,

If you are open to a programmatic solution, you can use isoreader (https://isoreader.isoverse.org/) to export the autosampler method together with other sequence information. In an R command line run the following (swap out the PATH/TO/SEQUENCE/FOLDER for where your sequence results are located). If you run into trouble, feel free to email directly.

install.packages("devtools");
devtools::install_github("isoverse/isoreader")

library(isoreader);
iso_read_continuous_flow("PATH/TO/SEQUENCE/FOLDER") %>% 
  iso_get_file_info(select = c(Analysis, `Identifier 1`, `Identifier 2`, `AS Method`)) %>% 
  write.csv("file_info_w_AS.csv")

cheers,

Seb

On Tue, Oct 13, 2020 at 5:45 AM Thomas Millican <[log in to unmask]> wrote:

As you pointed out, there doesn't seem to be an option for the autosampler
method name in the items that can be exported. You could name the method
file to reflect the autosampler method being used by its configuration and
export the Method name, which is a Sequence Information class item. That's
not a very elegant or proper solution though.

> Greetings, list.
>
> Does anyone know how to export into the usual spreadsheet file (I prefer
> .csv) the autosampler method names using IsoDat 3.0? It seems like it
> should be a Sequence Information class column, but I don't see it. Is it
> possible to set up as a custom identifier?
>

Tom Millican
Research Technician
Gulf Coast Research Laboratory
Ocean Springs, MS

——————————————————
Sebastian Kopf (he/his/him)
Assistant Professor
University of Colorado Boulder
Department of Geological Sciences
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+1 (303) 735-6207

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